Publication

NxGenBio Life Sciences services Publications :

1 . The first draft of the pigeonpea genome sequence

http://link.springer.com/article/10.1007%2Fs13562-011-0088-8

Co-Authored Publication :

2 . Salivary glands harbor more diverse microbial communities than gut in Anopheles culicifacies

http://www.parasitesandvectors.com/content/7/1/235

3 . Deep Sequencing revealed "Plant Like Transcripts" in mosquito Anopheles culicifacies: an Evolutionary Puzzle

http://biorxiv.org/content/early/2014/10/03/010009

4 . Transcriptome Wide Identification and Validation of Calcium Sensor Gene Family in the Developing Spikes of Finger Millet Genotypes for Elucidating Its Role in Grain Calcium Accumulation

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0103963

5 . Association of IRGM Gene Mutations with Inflammatory Bowel Disease in the Indian Population

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0106863

6 . Blood Feeding and Plasmodium Infection Alters the miRNome of Anopheles stephensi

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0098402

7 . De Novo Assembly and Characterization of Developing Spikes Transcriptome of Finger Millet (Eleusine coracana): a Minor Crop Having Nutraceutical Properties

http://link.springer.com/article/10.1007/s11105-014-0802-5

8 . Comparison of the Transcriptomes of Ginger (Zingiber officinale Rosc.) and Mango Ginger (Curcuma amada Roxb.) in Response to the Bacterial Wilt Infection

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0099731

9 . Draft Genome Sequence of Rhodomicrobium udaipurense JA643T with Special Reference to Hopanoid Biosynthesis

http://dnaresearch.oxfordjournals.org/content/early/2014/08/11/dnares.dsu026.full

10 . Next Generation Sequencing Reveals Regulation of Distinct Aedes microRNAs during Chikungunya Virus Development

http://www.plosntds.org/article/info%3Adoi%2F10.1371%2Fjournal.pntd.0002616

11 . Role of RNAi in dengue viral replication and identification of NS4B as a RNAi suppressor

http://jvi.asm.org/content/early/2013/05/30/JVI.02774-12.abstract

12 . An Integrated Genomic Approach for Rapid Delineation of Candidate Genes Regulating Agro-Morphological Traits in Chickpea

http://dnaresearch.oxfordjournals.org/content/early/2014/10/20/dnares.dsu031.full

13 . Natural Allelic Diversity, Genetic Structure and Linkage Disequilibrium Pattern in Wild Chickpea

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0107484

14 . Unraveling the microbial interactions in coal organic fermentation for generation of methane — A classical to metagenomic approach

http://www.sciencedirect.com/science/article/pii/S0166516214000317

15 . An insight into the regulation of mce4 operon of Mycobacterium tuberculosis

http://www.tuberculosisjournal.com/article/S1472-9792(13)00088-7/abstract

16 . Diversity and role of sulfate reducing prokaryotic communities in coal mines using metagenomics

http://ijals.com/wp-content/uploads/2013/09/8.-diversity-and-role-of-sulfate-reducing-prokaryotic.pdf

17 . Genome-wide high-throughput SNP discovery and genotyping for understanding natural (functional) allelic diversity and domestication patterns in wild chickpea Deepak Bajaj, Shouvik Das, Saurabh Badoni, Vinod Kumar, Mohar Singh, Kailash C. Bansal, Akhilesh K. Tyagi & Swarup K. Parida

http://www.nature.com/articles/srep12468

18 . High-density linkage map construction and mapping of seed trait QTLs in chickpea (Cicer arietinum L.) using Genotyping-by-Sequencing (GBS. Subodh Verma, Shefali Gupta, Nitesh Bandhiwal, Tapan Kumar, Chellapilla Bharadwaj & Sabhyata Bhatia

http://www.nature.com/articles/srep17512

19 . Identification of candidate genes and natural allelic variants for QTLs governing plant height in chickpea

http://www.nature.com/articles/srep27968

20 . Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea.

Shouvik Das1, Hari D. Upadhyaya2, Deepak Bajaj1, Alice Kujur1, Saurabh Badoni1, Laxmi1, Vinod Kumar3, Shailesh Tripathi4, C. L. Laxmipathi Gowda2, Shivali Sharma2, Sube Singh2, Akhilesh K. Tyagi1 and Swarup K. Parida1,*

http://dnaresearch.oxfordjournals.org/content/early/2015/04/27/dnares.dsv004.full

21 . A Genome-wide Combinatorial Strategy Dissects Complex Genetic Architecture of Seed Coat Color in Chickpea

Deepak Bajaj,1,† Shouvik Das,1,† Hari D. Upadhyaya,2,† Rajeev Ranjan,1 Saurabh Badoni,1 Vinod Kumar,3 Shailesh Tripathi,4 C. L. Laxmipathi Gowda,2 Shivali Sharma,2 Sube Singh,2 Akhilesh K. Tyagi,1 and Swarup K. Parida1,*

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4647070/

22 . Natural Allelic Diversity, Genetic Structure and Linkage Disequilibrium Pattern in Wild Chickpea

Maneesha S. Saxena ,Deepak Bajaj ,Alice Kujur,Shouvik Das,Saurabh Badoni, Mohar Singh,Kailash C. Bansal,Akhilesh K. Tyagi,Swarup K. Parida

http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0107484#s2

23 . Whole-Genome Sequence of Vibrio alginolyticus Isolated from the Mucus of the Coral Fungia danai in the Andaman Sea, India

Tilothama Bhotra and Durg V. Singh

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4859185/

24 . Composition and Functional Characterization of Microbiome Associated with Mucus of the Coral Fungia echinata Collected from Andaman Sea

Jhasketan Badhai,1 Tarini S. Ghosh,2 and Subrata K. Das1,*

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4909750/

25 . Whole-Genome Sequences of Staphylococcus haemolyticus Isolated from Infected Eyes and Healthy Conjunctiva in Bhubaneswar, India

Sasmita Panda and Durg V. Singh

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4796119/

26 . Association of IRGM Gene Mutations with Inflammatory Bowel Disease in the Indian Population

Kirankumar Baskaran,1 Srinivasan Pugazhendhi,1 and Balakrishnan S. Ramakrishna1,2,*

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4156415/

27 . Draft Genome Sequence of Rhodomicrobium udaipurense JA643T with Special Reference to Hopanoid Biosynthesis

L. Tushar,1 Ch. Sasikala,2 and Ch. V. Ramana1,*

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4263297/

28 . Taxonomic and functional characteristics of microbial communities and their correlation with physicochemical properties of four geothermal springs in Odisha, India

Jhasketan Badhai,1 Tarini S. Ghosh,2 and Subrata K. Das1,*

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4620158/

29 . Draft genome of the wheat rust pathogen (Puccinia triticina) unravels genome-wide structural variations during evolution

Kanti Kiran1, Hukam C Rawal1, Himanshu Dubey1, Rajdeep Jaswal1, B.N Devanna1, Deepak Kumar Gupta1, Subhash C Bhardwaj2, P Prasad2, Dharam Pal3, Parveen Chhuneja4, P Balasubramanian5, J Kumar6, M Swami7, Amolkumar U Solanke1, Kishor Gaikwad1, Nagendra K Singh1 and Tilak Raj Sharma1

http://gbe.oxfordjournals.org/content/early/2016/08/12/gbe.evw197.abstract

30 . Draft genome sequence of Karnal bunt pathogen (Tilletia indica) of wheat provides insights into the pathogenic mechanisms of quarantined fungus

31 . Dissection of genomic features and variations of three pathotypes of Puccinia striiformis through whole genome sequencing

32 . Genotyping-by-Sequencing Analysis for Determining Population Structure of Finger Millet Germplasm of Diverse Origins

33 . Comparative transcriptome analysis reveals candidate genes for the biosynthesis of natural insecticide in Tanacetum cinerariifolium
 Sana Khan,1 Swati Upadhyay,1 Feroz Khan,2 Sudeep Tandon,3 Rakesh Kumar Shukla,1 Sumit Ghosh,1 Vikrant Gupta,1 Suchitra Banerjee,1 and Laiq ur Rahman 1

LATEST MULTI SITE MULTI ETHNIC STUDY PUBLICATION: (CO-AUTHORED By NXGENBIO)

34 . Pre-therapy liver transcriptome landscape in Indian and French patients with severe alcoholic hepatitis and steroid responsiveness. Scientific Reports 7,

Shvetank Sharma, Jaswinder S. Maras, Sukanta Das, Shabir Hussain, Ashwani K. Mishra,Saggere M.Shasthry,Chhagan B. Sharma, Emmanuel Weiss, Laure Elkrief, Pierre-Emmanuel Rautou, Hélène Gilgenkrantz, Sophie Lotersztajn, Valérie Paradis, Pierre de la Grange, Christophe Junot, Richard Moreau & Shiv K. Sarin

CONFERENCES & WORKSHOPS :